Package index • camtraptor

Read data

read_camtrapdp(): Read a Camera Trap Data Package
example_dataset(): Read the Camtrap DP example dataset
mica deprecated: Deprecated datasets in camtraptor
read_camtrap_dp() deprecated: Read a Camera Trap Data Package

Filter data

filter_deployments(): Filter deployments
filter_media(): Filter media
filter_observations(): Filter observations
filter_out_timelapse(): Filter out timelapse observations

Explore data

summarize_deployments() summarise_deployments(): Summarize deployments information
summarize_observations() summarise_observations(): Summarize observations information
get_custom_effort() deprecated: Get custom effort
get_effort() deprecated: Get effort
get_n_individuals() deprecated: Get number of individuals for each deployment
get_n_obs() deprecated: Get number of observations for each deployment
get_n_species() deprecated: Get number of identified species for each deployment
get_rai() deprecated: Get Relative Abundance Index (RAI)
get_rai_individuals() deprecated: Get Relative Abundance Index (RAI) based on the sum of individual counts

Visualize data

map_summary(): Visualize deployments features
map_dep() deprecated: Visualize deployments features

Create outputs for camtrapR

These functions are superseded because camtrapR supports reading Camera Trap Data Packages.

get_cam_op() superseded: Get the camera operation matrix
get_detection_history() superseded: Get the detection history of a species
get_record_table() superseded: Get the record table

Estimate density

calculate_individual_radius_angle(): Calculate animal position
calc_animal_pos() deprecated: Calculate animal position

Accessor (and assignment) functions

contributors() `contributors<-`(): Get or set contributors
deployments() `deployments<-`(): Get or set deployments
events(): Get events
individuals(): Get individuals
locations(): Get locations
media() `media<-`(): Get or set media
observations() `observations<-`(): Get or set observations
taxa(): Get taxa
get_species() deprecated: Get species

Transformation functions

add_coordinates(): Add deployment coordinates to observations

Sample data

example_dataset(): Read the Camtrap DP example dataset
mica deprecated: Deprecated datasets in camtraptor
animal_pos deprecated: Deprecated datasets in camtraptor
animal_positions: Sample of animal position digitization data
calib_models deprecated: Deprecated datasets in camtraptor
calibration_models: Sample of deployment calibration models