Shoots
from Fieldmap
database for inconsistenciesR/check_data_shoots.R
check_data_shoots.Rd
This function retrieves the important fields of table Shoots
(of all
periods) from the given database and checks for missing data or wrong input.
check_data_shoots(database, forest_reserve = "all")
Dataframe with inconsistent data with ID's and additional columns
aberrant_field
(which column is wrong) and anomaly
(what is wrong with
the input)
library(forrescalc)
# (add path to your own fieldmap database here)
path_to_fieldmapdb <-
system.file("example/database/mdb_bosres.sqlite", package = "forrescalc")
check_data_shoots(path_to_fieldmapdb)
#> # A tibble: 0 × 7
#> # ℹ 7 variables: plot_id <int>, tree_measure_id <int>, shoot_id <int>,
#> # period <dbl>, aberrant_field <chr>, anomaly <chr>, aberrant_value <lgl>
check_data_shoots(path_to_fieldmapdb, forest_reserve = "Everzwijnbad")
#> # A tibble: 0 × 7
#> # ℹ 7 variables: plot_id <int>, tree_measure_id <int>, shoot_id <int>,
#> # period <dbl>, aberrant_field <chr>, anomaly <chr>, aberrant_value <lgl>