check table Deadwood from Fieldmap database for inconsistencies

This function retrieves the important fields of table Deadwood (of all periods) from the given database and checks for missing data or wrong input.

check_data_deadwood(database, forest_reserve = "all")

Arguments

database

name of Fieldmap/Access database (with specific Fieldmap structure) including path

forest_reserve

name of forest reserve for which the records in the database should be checked (defaults to "all")

Value

Dataframe with inconsistent data with ID's and additional columns aberrant_field (which column is wrong) and anomaly (what is wrong with the input)

Examples

library(forrescalc)
# (add path to your own fieldmap database here)
path_to_fieldmapdb <-
  system.file("example/database/mdb_bosres.sqlite", package = "forrescalc")
check_data_deadwood(path_to_fieldmapdb)
#> # A tibble: 2 × 6
#>   plot_id lying_deadw_id period aberrant_field  anomaly    aberrant_value
#>     <int>          <int>  <int> <chr>           <chr>               <dbl>
#> 1     101          11587      1 max_diameter_mm too low                10
#> 2     101          11587      1 alive_dead      tree alive             11
check_data_deadwood(path_to_fieldmapdb, forest_reserve = "Everzwijnbad")
#> # A tibble: 2 × 6
#>   plot_id lying_deadw_id period aberrant_field  anomaly    aberrant_value
#>     <int>          <int>  <int> <chr>           <chr>               <dbl>
#> 1     101          11587      1 max_diameter_mm too low                10
#> 2     101          11587      1 alive_dead      tree alive             11